> For the complete documentation index, see [llms.txt](https://docs.mithrl.com/llms.txt). Markdown versions of documentation pages are available by appending `.md` to page URLs; this page is available as [Markdown](https://docs.mithrl.com/getting-started.md).

# Getting Started

- [Overview](https://docs.mithrl.com/getting-started/readme.md)
- [Mithrl Web App Quick Start Guide](https://docs.mithrl.com/getting-started/readme/mithrl-web-app-quick-start-guide.md)
- [Navigating the Mithrl Web App](https://docs.mithrl.com/getting-started/readme/navigating-the-mithrl-web-app.md)
- [Settings](https://docs.mithrl.com/getting-started/readme/settings.md)
- [CLI Installation](https://docs.mithrl.com/getting-started/installation.md)
- [CLI Quick start](https://docs.mithrl.com/getting-started/quickstart.md)
- [Setting up SSO & Directory Sync](https://docs.mithrl.com/getting-started/sso-directory-sync.md)
- [Inference Algorithms](https://docs.mithrl.com/getting-started/inference-algorithms.md)
- [Canonical Pathway Analysis](https://docs.mithrl.com/getting-started/inference-algorithms/canonical-pathway-analysis.md)
- [Upstream Regulator Analysis](https://docs.mithrl.com/getting-started/inference-algorithms/upstream-regulator-analysis.md)
- [Toxicity Endpoint Analysis](https://docs.mithrl.com/getting-started/inference-algorithms/toxicity-endpoint-analysis.md)